species:   Opsin
pid:       PID1930
parent:    n_os_milR_14
paralog:   
locus:     JAAVMX010000002.1:1309641-1309766
matures:   ['UGGCGCUAAGACCUAUGGG', 'CACAUGUCUUAGCGCCACC']
srr:       SRR12952905
genome:    /Users/jax/+Genomes/Fungal_genomes/Opsin.GCA_012934285.1_ASM1293428v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zhang2021-wd.SRR12952905.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zhang2021-wd.SRR12952905.cram JAAVMX010000002.1:1309641-1309766

0 out of bounds
1 alignments
0 proper strand
0 stranded perfect matches

               **************************                                            **************************               
GGUGGGGGCCCCACAUGUCUUAGCGCCACCAAAUUUGUAUUGGGCCAGUACCUGCCUGCACCCGCCCUAGCCAUUGUCCACGACAAGUACAAAUUUAGUGGCGCUAAGACCUAUGGGGCCCCUACU
(((((((((((((...(((((((((((((.((((((((((((((((((.......))).....)))).......((((...))))))))))))))).)))))))))))))...)))))))))))))
--------------------------------------------------------------------------------------------------UGGCGCUAAGACCUAUGGG--------- l=19 a=0 c
-----------CACAUGUCUUAGCGCCACC------------------------------------------------------------------------------------------------ l=19 a=0 c*
--------------------------------------------------------------------------------------------------UGGCGCUAAGACCUAUGGG--------- l=19 a=0 ma
-----------CACAUGUCUUAGCGCCACC------------------------------------------------------------------------------------------------ l=19 a=0 ma*


No alignments to locus

mb-01011
ax-1011001
ku-01
ss-110011011100
fn-001
